Antigen

Antigen Class

TFs and others

Antigen

BNC2

Cell type

Cell type Class

Liver

Cell type

LX2

NA

NA

Sample

source_name

LX2

antibody

BNC2 from Sigma ref HPA018525

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP was performed using BNC2 (Sigma, HPA018525) or H3K27ac antibody (Active Motif ref 39685). TruSeq ChIP Sample Preparation Kit (BNC2) or DNBseq involving Probe-Anchor Synthesis (cPAS), linear isothermal Rolling-Circle Replication and DNA Nanoballs (DNBTM) technology, followed by high-resolution digital imaging.

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

67539994

Reads aligned (%)

97.6

Duplicates removed (%)

14.2

Number of peaks

2119 (qval < 1E-05)

hg19

Number of total reads

67539994

Reads aligned (%)

96.6

Duplicates removed (%)

16.3

Number of peaks

1461 (qval < 1E-05)